Skip to main content

Mapping Researchers, Methodologies, Institutes in a Graph Database


I have developed a graph database that aggregates and organizes scientific studies focusing on prominent sequencing techniques (e.g., RNA-seq, scRNA-seq, WGS, WES, ATAC-seq). This flexible design can be transferred to SQL-like framework.

Core Database Structure


Core Database Structure

Visualization of Data Query Capabilities


Flexibility in querying detailed information about studies and researchers:

Studies from JournalsResearchers by Location

📽️ Additional Media


Check here and here for videos.

Querying Platforms, Techniques, Methodologies


Below a few plots showing occurence of terms in papers:

Sequencing Platforms Overview
BGI PlatformIllumina PlatformNanopore PlatformPacBio PlatformThermoFisher Platform
Single-read vs Paired-end & WGS vs WES (Example: Germany)
Combined BasePair AnalysisWGS vs WES in Germany
Single-cell and Spatial Transcriptomics Analysis
scRNA-seq AnalysisSpatial Transcriptomics Analysis